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All documents must be in English or include an official English translation.
*Applications will be reviewed on a rolling-basis.
CDC Office and Location: A research and training opportunity is available in the Bacterial Special Pathogens Branch (BSPB), Division of High-Consequence Pathogens and Pathology (DHCPP) of the National Centers for Emerging and Zoonotic Infectious Diseases (NCEZID) at the Centers for Disease Control and Prevention (CDC) located in Atlanta, Georgia. Partial or fully remote work is available following https://orise.orau.gov/usda-ars/documents/orise-virtual-remote-mentor-guide.pdf
The Centers for Disease Control and Prevention (CDC) is one of the major operation components of the Department of Health and Human Services. CDC works to protect America from health, safety and security threats, both foreign and in the U.S. Whether diseases start at home or abroad, are chronic or acute, curable or preventable, human error or deliberate attack, CDC fights disease and supports communities and citizens to do the same.
BSPB serves as a national reference laboratory for several high consequence bacterial pathogens, including Bacillus anthracis, Burkholderia mallei and pseudomallei, Brucella spp., as well as over 500 rare and unusual bacterial pathogens. A major component of the work done within BSPB is developing and maintaining bioinformatic tools to assist BSPB and its partners (both national and international) to investigate outbreaks, conduct surveillance, and identify novel species of bacterial pathogens.
Research Project: BSPB is looking for a candidate to participate in data management, bioinformatic pipeline development, analysis and visualization projects related to genomic and metagenomic data for bacterial pathogens. The fellow will conduct research on containerizing specialized bioinformatic pipelines, currently in use within the branch, so that standardized bioinformatic tools may be deployed to partner labs unable to perform their own genomic analysis. This will increase both national and international capacity and ensure that genomic analysis is being performed in a consistent and reproducible manner between multiple laboratories. The fellow will also collaborate with MicrobeNet, a free online virtual reference laboratory run within BSPB, to create an organized state and national surveillance network of diseases which are not currently captured by active systems.
Learning Objectives:
The qualified candidate should have received a bachelors, master’s, or doctoral degree in one of the relevant fields (e.g. Bioinformatics), or be currently pursuing one of the degrees with completion by January 1, 2023. The most recent degree must have been received in the past five years.
Preferred Skills:
I certify that I have not previously been employed by CDC or by a contractor working directly for CDC. I understand that CDC does not permit individuals with a prior employment relationship with CDC or its contractors to participate as trainees in the ORISE program. (Exceptions may be granted for individuals who, since the previous CDC employment, have obtained a new STEM degree which necessitates training in a new field.)
ORISE GO
The ORISE GO mobile app helps you stay engaged, connected and informed during your ORISE experience – from application, to offer, through your appointment and even as an ORISE alum!
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